Miyakogusa Predicted Gene

Lj0g3v0112719.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7I9X4_MEDTR 726 78.4 85.1 (tr|G7I9X4) Delta-6-desaturase OS=Medicago truncatula GN=MTR_1g016070 PE=4 SV=1
TAIR_pep AT2G46210.1 609 63.3 77.3 | Symbols: | Fatty acid/sphingolipid desaturase | chr2:18977542-18978891 FORWARD LENGTH=449
Medicago Medtr1g016070.1 726 78.4 85.1 | fatty acid/sphingolipid desaturase | HC | chr1:4195061-4196827 | 20130731
Soybean Glyma14g10890.1 654 73.6 81.3  
LJGI gnl|LJGI|TC74648 1592 99.9 99.9 similar to UniRef100_Q5VLQ6 Cluster: Delta-6-desaturase; n=1; Camellia sinensis|Rep: Delta-6-desaturase - Camellia sinensis (Tea), partial (54%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0112719.1 length: 452 aa.
IPR001199 Cytochrome b5-like heme/steroid binding domain
method AccNumber shortName E-value location
Molecular Function GO:0020037 heme binding    
Gene3D G3DSA:3.10.120.10 no description 3.8e-23 10-84
HMMPfam PF00173 Cyt-b5 4.5e-22 13-83
ProfileScan PS50255 CYTOCHROME_B5_2 23.472 10-94
superfamily SSF55856 Cytochrome 2e-27 9-84
IPR005804 Fatty acid desaturase, type 1
Biological Process GO:0006629 lipid metabolic process    
HMMPfam PF00487 FA_desaturase 6.9e-38 140-411
IPR012171 Fatty acid/sphingolipid desaturase
Molecular Function GO:0005506 iron ion binding    
Biological Process GO:0006633 fatty acid biosynthetic process    
Molecular Function GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water    
Molecular Function GO:0020037 heme binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPIR PIRSF015921 Fatty 2.7e-170 13-443
no_ID  
HMMPanther PTHR19353 FATTY 9.9e-122 16-448
HMMPanther PTHR19353:SF7 SUBFAMILY 9.9e-122 16-448
Seg seg seg NA 221-236
Putative transmembrane regions
  From To
TM segments
SOSUI		 124 146
295 317
Wolf-PSORT
Lj0g3v0112719.1	cyto 4, E.R. 3, cyto_nucl 3, chlo 2, nucl 2, E.R._vacu 2, cyto_pero 2, E.R._plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0112719.1