Miyakogusa Predicted Gene
- Lj0g3v0112359.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1M6I6_SOYBN |
200 |
50.9 |
62.1 |
(tr|I1M6I6) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT3G13070.1 |
144 |
48.4 |
64.3 |
| Symbols: | CBS domain-containing protein / transporter associated domain-containing protein | chr3:4191511-4195112 REVERSE LENGTH=661 |
| Medicago |
Medtr5g094740.1 |
186 |
46.0 |
59.8 |
| CBS domain protein/transporter associated domain protein | HC | chr5:41403459-41394774 | 20130731 |
| Soybean |
Glyma14g01920.1 |
200 |
50.9 |
62.1 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0112359.1 |
length: 229 aa. |
| IPR002550 |
Domain of unknown function DUF21 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF01595 |
DUF21 |
1.1e-11 |
160-220 |
| no_ID |
|
| HMMPanther |
PTHR22777 |
HEMOLYSIN-RELATED |
1.2e-12 |
132-224 |
| HMMPanther |
PTHR22777:SF0 |
SUBFAMILY |
1.2e-12 |
132-224 |
| Seg |
seg |
seg |
NA |
160-173 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
2 |
24 |
| 106 |
128 |
| 150 |
172 |
- Wolf-PSORT
Lj0g3v0112359.1 chlo 9, E.R._vacu 2, vacu 1.5, E.R. 1.5, plas 1, extr 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0112359.1 |
|