Miyakogusa Predicted Gene

Lj0g3v0112319.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL D7TTF9_VITVI 77.0 67.9 81.1 (tr|D7TTF9) Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0012g00670 PE=4 SV=1

TAIR_pep AT3G57770.1 55.8 83.3 93.3 | Symbols: | Protein kinase superfamily protein | chr3:21397542-21398421 FORWARD LENGTH=269

Medicago Medtr4g118580.1 71.6 64.3 73.2 | hypothetical protein | LC | chr4:49106193-49110487 | 20130731

Soybean Glyma17g30860.1 53.5 86.7 93.3

LJGI gnl|LJGI|TC61268 192 93.4 93.4 similar to UniRef100_A7QT50 Cluster: Chromosome undetermined scaffold_165, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_165, whole genome shotgun sequence - Vitis vinifera (Grape), partial (93%)

Putative transmembrane regions

From To

TM segments
SOSUI 36 57

Wolf-PSORT

Lj0g3v0112319.1 cyto 7, cyto_nucl 7, nucl 3, extr 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0112319.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	D7TTF9_VITVI	77.0	67.9	81.1	(tr\|D7TTF9) Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0012g00670 PE=4 SV=1
TAIR_pep	AT3G57770.1	55.8	83.3	93.3	\| Symbols: \| Protein kinase superfamily protein \| chr3:21397542-21398421 FORWARD LENGTH=269
Medicago	Medtr4g118580.1	71.6	64.3	73.2	\| hypothetical protein \| LC \| chr4:49106193-49110487 \| 20130731
Soybean	Glyma17g30860.1	53.5	86.7	93.3
LJGI	gnl\|LJGI\|TC61268	192	93.4	93.4	similar to UniRef100_A7QT50 Cluster: Chromosome undetermined scaffold_165, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome undetermined scaffold_165, whole genome shotgun sequence - Vitis vinifera (Grape), partial (93%)