Miyakogusa Predicted Gene
- Lj0g3v0111309.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
B9RXC4_RICCO |
347 |
54.9 |
68.7 |
(tr|B9RXC4) Vacuolar protein sorting-associated protein, putative OS=Ricinus communis GN=RCOM_0902510 PE=4 SV=1 |
| TAIR_pep |
AT5G24740.1 |
244 |
41.2 |
59.6 |
| Symbols: | Protein of unknown function (DUF1162) | chr5:8470073-8489703 REVERSE LENGTH=3464 |
| Medicago |
Medtr2g007250.1 |
537 |
80.4 |
86.5 |
| vacuolar protein sorting-associated protein, putative | HC | chr2:875474-913892 | 20130731 |
| Soybean |
Glyma13g24300.1 |
84.0 |
97.4 |
100.0 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0111309.1 |
length: 337 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR25806 |
FAMILY |
2.2e-69 |
61-306 |
| HMMPanther |
PTHR25806:SF9 |
SUBFAMILY |
2.2e-69 |
61-306 |
| Seg |
seg |
seg |
NA |
234-240 |
- Wolf-PSORT
Lj0g3v0111309.1 nucl 8, chlo 2, cyto 2, extr 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0111309.1 |
|