Miyakogusa Predicted Gene

Lj0g3v0111069.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MI15_SOYBN 521 77.1 86.6 (tr|K7MI15) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G42450.1 326 55.7 71.0 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr5:16977297-16978850 FORWARD LENGTH=517
Medicago Medtr3g011920.1 426 65.4 77.1 | PPR containing plant-like protein | HC | chr3:3106602-3104668 | 20130731
Soybean Glyma16g29850.1 331 87.2 92.8  
LJGI gnl|LJGI|TC65116 1172 99.3 99.3 weakly similar to UniRef100_A7PSX6 Cluster: Chromosome chr8 scaffold_29, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_29, whole genome shotgun sequence - Vitis vinifera (Grape), partial (25%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0111069.1 length: 336 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0037 81-106
283-310
HMMPfam PF12854 PPR_1 7.1e-08 175-205
HMMPfam PF13041 PPR_2 1.4e-09 208-254
HMMTigr TIGR00756 PPR: 0.0019 81-112
179-210
210-243
283-311
ProfileScan PS51375 PPR 9.054 76-110
177-211
212-242
278-312
no_ID  
HMMPanther PTHR24015 FAMILY 1.5e-79 65-326
Wolf-PSORT
Lj0g3v0111069.1	chlo 8, cyto 4, mito 2, cyto_nucl 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0111069.1