Miyakogusa Predicted Gene

Lj0g3v0110109.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JDA7_SOYBN 842 68.4 75.7 (tr|I1JDA7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G09730.1 715 65.9 75.3 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD LENGTH=621
Medicago Medtr6g039840.1 826 64.8 74.2 | DEAD-box ATP-dependent RNA helicase | HC | chr6:14348854-14341230 | 20130731
Soybean Glyma02g08550.1 842 68.4 75.7  
LJGI gnl|LJGI|FS336505 1009 99.8 99.8 similar to UniRef100_A7QRK7 Cluster: Chromosome undetermined scaffold_151, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_151, whole genome shotgun sequence - Vitis vinifera (Grape), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0110109.1 length: 678 aa.
IPR001650 Helicase, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 1.8e-19 415-491
HMMSmart SM00490 helicase 2.6e-24 409-491
ProfileScan PS51194 HELICASE_CTER 17.410 380-533
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMPfam PF00270 DEAD 9.5e-39 161-344
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 2.1e-47 156-365
ProfileScan PS51192 HELICASE_ATP_BIND_1 27.340 168-355
IPR014014 RNA helicase, DEAD-box type, Q motif
ProfileScan PS51195 Q_MOTIF 10.937 137-165
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 2.3e-61 168-510
no_ID  
Gene3D G3DSA:3.40.50.300 no description 2.9e-39 124-362
366-521
HMMPanther PTHR24031 FAMILY 9.7e-185 124-545
HMMPanther PTHR24031:SF35 DEAD/DEAH 9.7e-185 124-545
Seg seg seg NA 2-15
35-52
118-138
624-643
645-660
Wolf-PSORT
Lj0g3v0110109.1	chlo 9.5, chlo_mito 7.33333, mito 4, cyto_mito 2.83333
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0110109.1