Miyakogusa Predicted Gene

Lj0g3v0109709.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KPR4_MEDTR 216 63.6 77.2 (tr|G7KPR4) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_6g069300 PE=4 SV=1
TAIR_pep AT1G12300.1 144 41.4 61.7 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:4184163-4186076 REVERSE LENGTH=637
Medicago Medtr6g079590.1 223 65.8 78.9 | pentatricopeptide (PPR) repeat protein | LC | chr6:30027878-30029913 | 20130731
Soybean Glyma16g28020.1 207 60.9 75.8  
LJGI gnl|LJGI|TC77080 93.7 79.8 79.8 weakly similar to UniRef100_A7QVP2 Cluster: Chromosome chr14 scaffold_190, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_190, whole genome shotgun sequence - Vitis vinifera (Grape), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0109709.1 length: 175 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF12854 PPR_1 1.1e-06 63-92
HMMPfam PF13041 PPR_2 1.3e-16 102-151
HMMTigr TIGR00756 PPR: 4.9e-07 73-104
105-138
140-173
ProfileScan PS51375 PPR 11.641 68-102
33-67
103-137
138-172
no_ID  
HMMPanther PTHR24015 FAMILY 3.1e-33 22-175
Seg seg seg NA 2-12
Wolf-PSORT
Lj0g3v0109709.1	chlo 9, mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0109709.1