Miyakogusa Predicted Gene
- Lj0g3v0109639.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JIV4_MEDTR |
931 |
84.1 |
91.4 |
(tr|G7JIV4) DUF246 domain-containing protein OS=Medicago truncatula GN=MTR_4g100810 PE=4 SV=1 |
| TAIR_pep |
AT4G16650.1 |
753 |
73.0 |
83.4 |
| Symbols: | O-fucosyltransferase family protein | chr4:9372727-9375910 FORWARD LENGTH=549 |
| Medicago |
Medtr4g100810.1 |
936 |
83.9 |
91.1 |
| GDP-fucose O-fucosyltransferase-like protein | HC | chr4:41604242-41599237 | 20130731 |
| Soybean |
Glyma17g15170.1 |
861 |
86.8 |
93.1 |
|
| LJGI |
gnl|LJGI|TC65437 |
1271 |
100.0 |
100.0 |
similar to UniRef100_O23508 Cluster: Growth regulator like protein; n=1; Arabidopsis thaliana|Rep: Growth regulator like protein - Arabidopsis thaliana (Mouse-ear cress), partial (13%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0109639.1 |
length: 537 aa. |
| IPR019378 |
GDP-fucose protein O-fucosyltransferase |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF10250 |
O-FucT |
4.9e-91 |
106-420 |
| no_ID |
|
| HMMPanther |
PTHR31818 |
FAMILY |
1.2e-209 |
18-518 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
17 |
39 |
- Wolf-PSORT
Lj0g3v0109639.1 chlo 4, vacu 3, chlo_mito 3, nucl 2, mito 2, E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0109639.1 |
|