Miyakogusa Predicted Gene

Lj0g3v0109429.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7L6K3_MEDTR 1004 73.4 85.5 (tr|G7L6K3) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_7g067460 PE=4 SV=1
TAIR_pep AT4G28010.1 595 47.3 67.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:13930379-13932493 FORWARD LENGTH=704
Medicago Medtr7g067460.1 1009 73.7 85.6 | TCP-1/cpn60 chaperonin family protein | HC | chr7:24639377-24633699 | 20130731
Soybean Glyma07g17870.1 952 72.5 82.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0109429.1 length: 712 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0055 138-161
HMMPfam PF12854 PPR_1 5.5e-10 301-333
410-440
HMMPfam PF13041 PPR_2 1e-10 165-214
236-284
340-388
448-496
517-564
587-634
HMMTigr TIGR00756 PPR: 2e-09 138-167
168-201
203-236
238-272
273-307
308-342
344-377
378-408
415-448
450-483
522-554
555-589
590-624
ProfileScan PS51375 PPR 9.372 61-95
131-165
96-130
166-200
201-235
236-270
271-305
306-340
341-375
376-410
413-447
448-482
483-517
518-552
553-587
588-622
623-657
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 9e-05 166-401
588-614
no_ID  
HMMPanther PTHR24015 FAMILY 7.5e-184 7-635
HMMPanther PTHR24015:SF0 SUBFAMILY 7.5e-184 7-635
Seg seg seg NA 15-31
superfamily SSF48452 TPR-like 0.013 271-370
166-265
superfamily SSF81901 HCP-like 7.6e-07 391-654
Wolf-PSORT
Lj0g3v0109429.1	mito 6, chlo 4, mito_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0109429.1