Miyakogusa Predicted Gene
- Lj0g3v0109249.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1M9M3_SOYBN |
526 |
74.9 |
83.5 |
(tr|I1M9M3) Uncharacterized protein OS=Glycine max PE=3 SV=2 |
| TAIR_pep |
AT1G15550.1 |
304 |
44.4 |
63.1 |
| Symbols: GA4, ATGA3OX1, GA3OX1 | gibberellin 3-oxidase 1 | chr1:5344569-5346078 REVERSE LENGTH=358 |
| Medicago |
Medtr1g011580.1 |
518 |
71.8 |
81.4 |
| gibberellin 2-beta-dioxygenase | HC | chr1:2083698-2086776 | 20130731 |
| Soybean |
Glyma14g16060.1 |
519 |
75.4 |
84.0 |
|
| LJGI |
gnl|LJGI|GO010663 |
1314 |
99.4 |
99.4 |
weakly similar to UniRef100_Q9FXW0 Cluster: Gibberellin 3b-hydroxylase No3; n=1; Lactuca sativa|Rep: Gibberellin 3b-hydroxylase No3 - Lactuca sativa (Garden lettuce), partial (32%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0109249.1 |
length: 373 aa. |
| IPR005123 |
Oxoglutarate/iron-dependent dioxygenase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016491 |
oxidoreductase activity |
|
|
| Molecular Function |
GO:0016706 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| HMMPfam |
PF03171 |
2OG-FeII_Oxy |
1e-20 |
231-327 |
| ProfileScan |
PS51471 |
FE2OG_OXY |
12.141 |
226-327 |
| IPR026992 |
Non-haem dioxygenase N-terminal domain |
| HMMPfam |
PF14226 |
DIOX_N |
1.6e-19 |
81-180 |
| IPR027443 |
Isopenicillin N synthase-like |
| Gene3D |
G3DSA:2.60.120.330 |
no description |
2.9e-75 |
64-359 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
190-211 |
| HMMPanther |
PTHR10209 |
OXIDOREDUCTASE, |
1e-90 |
63-371 |
| HMMPanther |
PTHR10209:SF55 |
OXIDOREDUCTASE, |
1e-90 |
63-371 |
| Seg |
seg |
seg |
NA |
15-27 |
| superfamily |
SSF51197 |
Clavaminate |
2.3e-83 |
79-372 |
- Wolf-PSORT
Lj0g3v0109249.1 chlo 8, cyto 2, mito 2, extr 1, E.R. 1, cyto_nucl 1, cyto_mito 1, cyto_pero 1, mito_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0109249.1 |
|