Miyakogusa Predicted Gene
- Lj0g3v0109069.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
M5W4G1_PRUPE |
282 |
55.9 |
69.4 |
(tr|M5W4G1) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005117mg PE=4 SV=1 |
| TAIR_pep |
AT5G01450.1 |
170 |
39.7 |
54.4 |
| Symbols: | RING/U-box superfamily protein | chr5:183693-186244 REVERSE LENGTH=444 |
| Medicago |
Medtr3g463920.1 |
244 |
57.2 |
70.7 |
| ubiquitin-protein ligase, putative | HC | chr3:25649684-25653834 | 20130731 |
| Soybean |
Glyma07g18240.1 |
220 |
44.1 |
61.2 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0109069.1 |
length: 246 aa. |
| IPR013083 |
Zinc finger, RING/FYVE/PHD-type |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.30.40.10 |
no description |
0.00016 |
210-243 |
| no_ID |
|
| HMMPfam |
PF13920 |
zf-C3HC4_3 |
2.7e-07 |
217-245 |
- Wolf-PSORT
Lj0g3v0109069.1 cyto 4, chlo 2, nucl 2, plas 2, E.R. 2, nucl_plas 2, cyto_pero 2, E.R._plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0109069.1 |
|