Miyakogusa Predicted Gene

Lj0g3v0108469.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SJG9_LOTJA 380 73.6 74.0 (tr|I3SJG9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G03860.3 331 66.3 74.2 | Symbols: ATPHB2, PHB2 | prohibitin 2 | chr1:979611-981157 REVERSE LENGTH=286
Medicago Medtr4g078200.1 355 67.8 71.8 | prohibitin complex protein | HC | chr4:30108428-30104328 | 20130731
Soybean Glyma11g11670.2 367 71.1 72.9  
LJGI gnl|LJGI|GO024550 914 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0108469.1 length: 246 aa.
IPR000163 Prohibitin
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
FPrintScan PR00679 PROHIBITIN 5.8e-29 80-96
98-117
121-139
144-160
HMMPanther PTHR23222 PROHIBITIN 2.1e-133 15-243
IPR001107 Band 7 protein
HMMPfam PF01145 Band_7 1.8e-13 39-162
HMMSmart SM00244 prohibitin 7e-23 36-195
no_ID  
Coil coil coiled-coil NA 153-174
Seg seg seg NA 2-16
152-163
226-240
superfamily SSF117892 Band 6.9e-07 68-175
Putative transmembrane regions
  From To
TM segments
SOSUI		 13 35
Wolf-PSORT
Lj0g3v0108469.1	extr 3, chlo 2, vacu 2, E.R. 2, pero 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0108469.1