Miyakogusa Predicted Gene
- Lj0g3v0108079.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3TA47_LOTJA |
396 |
99.0 |
99.0 |
(tr|I3TA47) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G54660.1 |
218 |
57.7 |
74.7 |
| Symbols: | HSP20-like chaperones superfamily protein | chr5:22203950-22204986 FORWARD LENGTH=192 |
| Medicago |
Medtr2g082180.1 |
315 |
79.4 |
89.4 |
| 21.7 kDa class VI heat shock protein | HC | chr2:34632664-34634578 | 20130731 |
| Soybean |
Glyma13g36220.1 |
325 |
80.8 |
91.7 |
|
| LJGI |
gnl|LJGI|TC59716 |
1110 |
99.3 |
99.3 |
similar to UniRef100_A7UNS9 Cluster: Heat shock protein; n=1; Corchorus olitorius|Rep: Heat shock protein - Corchorus olitorius, partial (82%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0108079.2 |
length: 191 aa. |
| IPR002068 |
Alpha crystallin/Hsp20 domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF00011 |
HSP20 |
3.6e-11 |
88-183 |
| ProfileScan |
PS01031 |
HSP20 |
14.834 |
88-177 |
| IPR008978 |
HSP20-like chaperone |
| superfamily |
SSF49764 |
HSP20-like |
3.9e-18 |
43-180 |
| no_ID |
|
| Gene3D |
G3DSA:2.60.40.790 |
no description |
3.5e-19 |
55-180 |
| HMMPanther |
PTHR11527 |
SMALL |
3.5e-61 |
12-177 |
| HMMPanther |
PTHR11527:SF5 |
SMALL |
3.5e-61 |
12-177 |
- Wolf-PSORT
Lj0g3v0108079.2 nucl 6, chlo 2, cyto 2, pero 2, cyto_pero 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0108079.2 |
|