Miyakogusa Predicted Gene

Lj0g3v0107819.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LQP8_SOYBN 257 58.2 72.1 (tr|K7LQP8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G14250.1 200 45.2 60.6 | Symbols: | RING/U-box superfamily protein | chr3:4745963-4746958 REVERSE LENGTH=303
Medicago Medtr3g462590.1 263 43.4 58.5 | zinc finger, C3HC4 type (RING finger) protein | LC | chr3:25026751-25027788 | 20130731
Soybean Glyma11g23850.1 225 57.9 72.1  
LJGI gnl|LJGI|TC63284 1951 100.0 100.0 weakly similar to UniRef100_Q1PEQ5 Cluster: Zinc finger protein-like protein; n=1; Arabidopsis thaliana|Rep: Zinc finger protein-like protein - Arabidopsis thaliana (Mouse-ear cress), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0107819.2 length: 327 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
ProfileScan PS50089 ZF_RING_2 10.011 122-167
IPR002867 Zinc finger, C6HC-type
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF01485 IBR 1.8e-07 205-252
270-321
HMMSmart SM00647 In 0.13 190-252
265-321
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 2.9e-05 104-180
IPR017907 Zinc finger, RING-type, conserved site
PatternScan PS00518 ZF_RING_1 NA 140-149
IPR018957 Zinc finger, C3HC4 RING-type
HMMPfam PF00097 zf-C3HC4 5.2e-05 122-167
no_ID  
HMMPanther PTHR11685 ARIADNE 2e-82 39-323
HMMPanther PTHR11685:SF63 OS11G0103400 2e-82 39-323
Seg seg seg NA 108-118
267-279
superfamily SSF57850 RING/U-box 4.3e-09 115-213
263-325
189-262
Wolf-PSORT
Lj0g3v0107819.2	nucl 5, chlo 4, cyto_nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0107819.2