Miyakogusa Predicted Gene

Lj0g3v0107249.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7K5H3_SOYBN 955 60.0 68.9 (tr|K7K5H3) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT5G43630.1 168 30.2 45.7 | Symbols: TZP | zinc knuckle (CCHC-type) family protein | chr5:17527261-17530207 FORWARD LENGTH=831

Medicago Medtr5g007040.1 671 53.2 62.8 | zinc knuckle (CCHC-type) family protein, putative | HC | chr5:1181132-1186024 | 20130731

Soybean Glyma01g44490.1 937 58.1 66.9

LJGI --No_Hits--

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0107249.1 length: 852 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 673-694

Seg seg seg NA 501-515
792-804

Wolf-PSORT

Lj0g3v0107249.1 nucl 11, chlo 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0107249.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7K5H3_SOYBN	955	60.0	68.9	(tr\|K7K5H3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT5G43630.1	168	30.2	45.7	\| Symbols: TZP \| zinc knuckle (CCHC-type) family protein \| chr5:17527261-17530207 FORWARD LENGTH=831
Medicago	Medtr5g007040.1	671	53.2	62.8	\| zinc knuckle (CCHC-type) family protein, putative \| HC \| chr5:1181132-1186024 \| 20130731
Soybean	Glyma01g44490.1	937	58.1	66.9
LJGI	--No_Hits--

no_ID
Lj0g3v0107249.1				length: 852 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	673-694
Seg	seg	seg	NA	501-515 792-804