Miyakogusa Predicted Gene

Lj0g3v0107099.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SKZ0_LOTJA 427 99.5 99.5 (tr|I3SKZ0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G25630.1 394 90.5 94.8 | Symbols: FIB2, ATFIB2 | fibrillarin 2 | chr4:13074239-13076205 FORWARD LENGTH=320
Medicago Medtr1g114000.1 404 93.8 96.7 | mediator of RNA polymerase II transcription subunit 36a | HC | chr1:51431328-51427705 | 20130731
Soybean Glyma11g36090.1 405 93.8 98.1  
LJGI gnl|LJGI|TC76348 1211 99.8 99.8 similar to UniRef100_Q25C91 Cluster: Tobacco fibrillarin homolog; n=1; Nicotiana tabacum|Rep: Tobacco fibrillarin homolog - Nicotiana tabacum (Common tobacco), partial (94%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0107099.1 length: 267 aa.
IPR000692 Fibrillarin
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Biological Process GO:0006364 rRNA processing    
Biological Process GO:0008033 tRNA processing    
Molecular Function GO:0008168 methyltransferase activity    
FPrintScan PR00052 FIBRILLARIN 6.7e-78 84-103
112-131
139-160
164-181
189-218
219-248
HMMPIR PIRSF006540 Fibrillarin 1.1e-156 1-267
HMMPanther PTHR10335 RRNA 1.7e-180 7-266
HMMPfam PF01269 Fibrillarin 7e-101 65-266
IPR020813 Fibrillarin, conserved site
Molecular Function GO:0003723 RNA binding    
Biological Process GO:0006364 rRNA processing    
Biological Process GO:0008033 tRNA processing    
Molecular Function GO:0008168 methyltransferase activity    
PatternScan PS00566 FIBRILLARIN NA 164-178
no_ID  
Gene3D G3DSA:3.30.200.20 no description 8.7e-27 60-116
Gene3D G3DSA:3.40.50.150 no description 3.2e-52 117-266
Seg seg seg NA 6-29
35-56
superfamily SSF53335 S-adenosyl-L-methionine-dependent 1.3e-47 62-266
Wolf-PSORT
Lj0g3v0107099.1	cyto 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0107099.1