Miyakogusa Predicted Gene

Lj0g3v0106869.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LDR8_SOYBN 718 91.8 95.5 (tr|K7LDR8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G23880.1 610 76.7 87.3 | Symbols: EMB1265, CPSF100, ESP5, ATCPSF100 | cleavage and polyadenylation specificity factor 100 | chr5:8052550-8058147 FORWARD LENGTH=739
Medicago Medtr1g050492.1 702 89.4 94.7 | cleavage and polyadenylation specificity factor subunit 2 | HC | chr1:19478035-19486897 | 20130731
Soybean Glyma11g27560.1 182 93.4 95.6  
LJGI gnl|LJGI|FS348088 706 100.0 100.0 similar to UniRef100_Q9LKF9 Cluster: Cleavage and polyadenylation specificity factor subunit 2; n=2; Arabidopsis thaliana|Rep: Cleavage and polyadenylation specificity factor subunit 2 - Arabidopsis thaliana (Mouse-ear cress), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0106869.1 length: 377 aa.
IPR011108 RNA-metabolising metallo-beta-lactamase
method AccNumber shortName E-value location
HMMPfam PF07521 RMMBL 3.1e-07 171-211
IPR025069 Cleavage and polyadenylation specificity factor 2, C-terminal
HMMPfam PF13299 CPSF100_C 2.6e-21 282-374
IPR027075 Cleavage and polyadenylation specificity factor subunit 2
Cellular Component GO:0005847 mRNA cleavage and polyadenylation specificity factor complex    
Biological Process GO:0006378 mRNA polyadenylation    
Biological Process GO:0006379 mRNA cleavage    
HMMPanther PTHR11203:SF5 CLEAVAGE 1.1e-72 13-374
no_ID  
Coil coil coiled-coil NA 29-50
HMMPanther PTHR11203 CLEAVAGE 1.1e-72 13-374
Wolf-PSORT
Lj0g3v0106869.1	cyto 5, chlo 3, nucl 3, cyto_pero 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0106869.1