Miyakogusa Predicted Gene
- Lj0g3v0106859.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S520_LOTJA |
140 |
98.6 |
100.0 |
(tr|I3S520) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1 |
| TAIR_pep |
AT5G55290.2 |
125 |
85.7 |
91.4 |
| Symbols: | ATPase, V0 complex, subunit E | chr5:22423037-22424086 REVERSE LENGTH=70 |
| Medicago |
Medtr5g094130.1 |
122 |
82.9 |
92.9 |
| ATPase, V0 complex, subunit E | HC | chr5:41112260-41115481 | 20130731 |
| Soybean |
Glyma08g43510.1 |
138 |
95.7 |
97.1 |
|
| LJGI |
gnl|LJGI|TC64876 |
422 |
100.0 |
100.0 |
similar to UniRef100_Q8GUB2 Cluster: Vacuolar ATPase subunit e-like; n=1; Mesembryanthemum crystallinum|Rep: Vacuolar ATPase subunit e-like - Mesembryanthemum crystallinum (Common ice plant), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0106859.1 |
length: 70 aa. |
| IPR008389 |
ATPase, V0 complex, subunit e1/e2 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0015078 |
hydrogen ion transmembrane transporter activity |
|
|
| Biological Process |
GO:0015991 |
ATP hydrolysis coupled proton transport |
|
|
| Cellular Component |
GO:0033179 |
proton-transporting V-type ATPase, V0 domain |
|
|
| HMMPanther |
PTHR12263 |
VACUOLAR |
2.7e-23 |
1-67 |
| HMMPfam |
PF05493 |
ATP_synt_H |
9.6e-22 |
1-68 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
3 |
25 |
| 39 |
61 |
- Wolf-PSORT
Lj0g3v0106859.1 extr 9, cyto 1, plas 1, vacu 1, E.R. 1, golg 1, golg_plas 1, E.R._vacu 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0106859.1 |
|