Miyakogusa Predicted Gene

Lj0g3v0105959.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MAR9_SOYBN 1347 82.6 90.7 (tr|I1MAR9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G78060.1 1009 64.2 78.0 | Symbols: | Glycosyl hydrolase family protein | chr1:29349796-29352868 REVERSE LENGTH=767
Medicago Medtr5g062430.1 1277 79.2 87.9 | glycoside hydrolase family 3 protein | HC | chr5:25929488-25923501 | 20130731
Soybean Glyma14g34480.1 1347 82.6 90.7  
LJGI gnl|LJGI|TC81616 1350 99.6 99.6 similar to UniRef100_A7NV08 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0105959.1 length: 778 aa.
IPR001764 Glycoside hydrolase, family 3, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
FPrintScan PR00133 GLHYDRLASE3 2.7e-05 116-135
210-226
284-302
Gene3D G3DSA:3.20.20.300 no description 3.4e-103 44-376
HMMPfam PF00933 Glyco_hydro_3 5.6e-62 67-361
IPR002772 Glycoside hydrolase family 3 C-terminal domain
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
Gene3D G3DSA:3.40.50.1700 no description 2.1e-59 390-636
HMMPfam PF01915 Glyco_hydro_3_C 5.1e-55 404-635
superfamily SSF52279 Beta-D-glucan 2.6e-50 404-637
IPR017853 Glycoside hydrolase, superfamily
superfamily SSF51445 (Trans)glycosidases 4.1e-93 41-403
IPR026891 Fibronectin type III-like domain
HMMPfam PF14310 Fn3-like 8.9e-10 703-770
IPR026892 Glycoside hydrolase family 3
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
HMMPanther PTHR30620 PERIPLASMIC 1.6e-257 1-769
no_ID  
HMMPanther PTHR30620:SF0 PERIPLASMIC 1.6e-257 1-769
Putative transmembrane regions
  From To
TM segments
SOSUI		 1 22
Wolf-PSORT
Lj0g3v0105959.1	chlo 6, vacu 3, golg 2, nucl 1, mito 1, extr 1, golg_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0105959.1