Miyakogusa Predicted Gene

Lj0g3v0105529.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SS23_LOTJA 407 99.0 99.0 (tr|I3SS23) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G23570.2 214 60.7 76.6 | Symbols: SGT1A | phosphatase-related | chr4:12300015-12302493 FORWARD LENGTH=350
Medicago Medtr6g053290.1 330 81.1 91.0 | suppressor of G2 allele of SKP1 protein | HC | chr6:19146957-19152713 | 20130731
Soybean Glyma16g29450.2 330 81.2 89.1  
LJGI gnl|LJGI|TC72535 1172 99.5 99.5 similar to UniRef100_A7QGA6 Cluster: Chromosome undetermined scaffold_91, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_91, whole genome shotgun sequence - Vitis vinifera (Grape), partial (89%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0105529.1 length: 201 aa.
IPR001440 Tetratricopeptide TPR-1
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00515 TPR_1 0.022 71-94
IPR007052 CS-like domain
ProfileScan PS51203 CS 8.628 156-201
IPR008978 HSP20-like chaperone
superfamily SSF49764 HSP20-like 4.4e-12 140-201
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2e-26 4-117
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 18.692 2-103
IPR017447 CS domain
HMMPfam PF04969 CS 1.6e-08 160-200
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 12 2-35
36-69
70-103
ProfileScan PS50005 TPR 5.959 2-35
36-69
70-103
no_ID  
Coil coil coiled-coil NA 42-63
Gene3D G3DSA:2.60.40.790 no description 2e-12 154-200
HMMPanther PTHR22904 TPR 1.1e-68 1-201
HMMPanther PTHR22904:SF10 SUPPRESSOR 1.1e-68 1-201
HMMPfam PF13414 TPR_11 1.5e-14 3-67
superfamily SSF48452 TPR-like 6.4e-23 1-116
Wolf-PSORT
Lj0g3v0105529.1	cyto 8.5, cyto_E.R. 5, chlo 3, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0105529.1