Miyakogusa Predicted Gene

Lj0g3v0105319.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1JGU8_SOYBN 860 79.0 85.6 (tr|I1JGU8) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT1G22410.1 815 84.6 92.2 | Symbols: | Class-II DAHP synthetase family protein | chr1:7912120-7914742 FORWARD LENGTH=527

Medicago Medtr5g064500.1 841 78.1 83.4 | phospho-2-dehydro-3-deoxyheptonate aldolase | HC | chr5:27089729-27094453 | 20130731

Soybean Glyma02g37080.1 860 79.0 85.6

LJGI gnl|LJGI|TC64309 1096 86.9 86.9 homologue to UniRef100_A7NUV4 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (82%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0105319.1 length: 529 aa.

IPR002480 DAHP synthetase, class II

method AccNumber shortName E-value location

Molecular Function GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity

Biological Process GO:0009073 aromatic amino acid family biosynthetic process

HMMPanther PTHR21337 PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE 2e-287 74-529

HMMPfam PF01474 DAHP_synth_2 1.4e-198 73-510

HMMTigr TIGR01358 DAHP_synth_II: 3.9e-226 74-517

no_ID

HMMPanther PTHR21337:SF0 SUBFAMILY 2e-287 74-529

Seg seg seg NA 56-75
159-170

superfamily SSF51569 Aldolase 7.1e-199 51-515

Wolf-PSORT

Lj0g3v0105319.1 chlo 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0105319.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1JGU8_SOYBN	860	79.0	85.6	(tr\|I1JGU8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT1G22410.1	815	84.6	92.2	\| Symbols: \| Class-II DAHP synthetase family protein \| chr1:7912120-7914742 FORWARD LENGTH=527
Medicago	Medtr5g064500.1	841	78.1	83.4	\| phospho-2-dehydro-3-deoxyheptonate aldolase \| HC \| chr5:27089729-27094453 \| 20130731
Soybean	Glyma02g37080.1	860	79.0	85.6
LJGI	gnl\|LJGI\|TC64309	1096	86.9	86.9	homologue to UniRef100_A7NUV4 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (82%)

IPR002480	DAHP synthetase, class II
Lj0g3v0105319.1				length: 529 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0003849	3-deoxy-7-phosphoheptulonate synthase activity
Biological Process	GO:0009073	aromatic amino acid family biosynthetic process
HMMPanther	PTHR21337	PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE	2e-287	74-529
HMMPfam	PF01474	DAHP_synth_2	1.4e-198	73-510
HMMTigr	TIGR01358	DAHP_synth_II:	3.9e-226	74-517
no_ID
HMMPanther	PTHR21337:SF0	SUBFAMILY	2e-287	74-529
Seg	seg	seg	NA	56-75 159-170
superfamily	SSF51569	Aldolase	7.1e-199	51-515