Miyakogusa Predicted Gene

Lj0g3v0104969.1

Related links:

GeneModel
LORE1 insertion

Predicted Sequence Links:

Translated sequence
Nucleotide sequence

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL --No_Hits--

TAIR_pep --No_Hits--

Medicago --No_Hits--

Soybean --No_Hits--

LJGI gnl|LJGI|TC58672 196 88.2 88.2 weakly similar to UniRef100_Q6GLC1 Cluster: LUC7-like; n=1; Xenopus tropicalis|Rep: LUC7-like - Xenopus tropicalis (Western clawed frog) (Silurana tropicalis), partial (7%)

Putative transmembrane regions

From To

TM segments
SOSUI 1 17

24 46

Wolf-PSORT

Lj0g3v0104969.1 extr 7, chlo 6

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0104969.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	--No_Hits--
TAIR_pep	--No_Hits--
Medicago	--No_Hits--
Soybean	--No_Hits--
LJGI	gnl\|LJGI\|TC58672	196	88.2	88.2	weakly similar to UniRef100_Q6GLC1 Cluster: LUC7-like; n=1; Xenopus tropicalis\|Rep: LUC7-like - Xenopus tropicalis (Western clawed frog) (Silurana tropicalis), partial (7%)