Miyakogusa Predicted Gene
- Lj0g3v0104949.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
--No_Hits--
|
|
|
|
|
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
Medtr2g076590.1 |
46.6 |
76.9 |
88.5 |
| epidermis-specific secreted EP1-like glycoprotein | HC | chr2:32063871-32065553 | 20130731 |
| Soybean |
Glyma13g34520.1 |
53.1 |
88.5 |
92.3 |
|
| LJGI |
gnl|LJGI|TC74244 |
149 |
93.9 |
93.9 |
weakly similar to UniRef100_A7P215 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (71%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0104949.1 |
length: 80 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
4-24 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
6 |
28 |
- Wolf-PSORT
Lj0g3v0104949.1 chlo 4, extr 4, nucl 2, cyto 1, mito 1, vacu 1, E.R. 1, cysk_nucl 1, nucl_plas 1, E.R._vacu 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0104949.1 |
|