Miyakogusa Predicted Gene
- Lj0g3v0104809.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JB86_MEDTR |
351 |
89.8 |
94.6 |
(tr|G7JB86) DNA replication complex GINS protein PSF3 OS=Medicago truncatula GN=MTR_3g070470 PE=4 SV=1 |
| TAIR_pep |
AT3G55490.1 |
285 |
69.0 |
84.2 |
| Symbols: | GINS complex protein | chr3:20572171-20573415 REVERSE LENGTH=185 |
| Medicago |
Medtr3g070470.2 |
351 |
89.8 |
94.6 |
| DNA replication complex GINS protein | HC | chr3:31621672-31624900 | 20130731 |
| Soybean |
Glyma11g35260.2 |
318 |
87.6 |
93.0 |
|
| LJGI |
gnl|LJGI|TC58487 |
920 |
95.4 |
95.4 |
similar to UniRef100_UPI0000162E01 Cluster: TTN10 (TITAN 10); n=1; Arabidopsis thaliana|Rep: TTN10 (TITAN 10) - Arabidopsis thaliana, partial (87%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0104809.1 |
length: 185 aa. |
| IPR010492 |
GINS complex, subunit Psf3 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR22768 |
UNCHARACTERIZED |
3.7e-59 |
1-182 |
| IPR021151 |
GINS complex |
| HMMPfam |
PF05916 |
Sld5 |
7.8e-10 |
45-148 |
- Wolf-PSORT
Lj0g3v0104809.1 cyto 5, cysk 3, nucl 2, extr 2, chlo 1, golg 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0104809.1 |
|