Miyakogusa Predicted Gene

Lj0g3v0104499.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A9YWR6_MEDTR 462 78.7 82.0 (tr|A9YWR6) ABC transporter OS=Medicago truncatula GN=STR2 PE=2 SV=1
TAIR_pep AT3G55100.1 171 52.2 68.7 | Symbols: | ABC-2 type transporter family protein | chr3:20420352-20422340 REVERSE LENGTH=662
Medicago Medtr5g030910.1 462 78.7 82.0 | white-brown-complex ABC transporter family protein | HC | chr5:13231057-13235148 | 20130731
Soybean Glyma09g33520.1 450 77.0 81.5  
LJGI gnl|LJGI|GO012322 1037 99.6 99.6 similar to UniRef100_A9YWR6 Cluster: ABC transporter; n=1; Medicago truncatula|Rep: ABC transporter - Medicago truncatula (Barrel medic), partial (29%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0104499.1 length: 547 aa.
IPR003439 ABC transporter-like
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 3.5e-06 76-183
ProfileScan PS50893 ABC_TRANSPORTER_2 10.644 25-270
IPR013525 ABC-2 type transporter
Cellular Component GO:0016020 membrane    
HMMPfam PF01061 ABC2_membrane 2.4e-36 238-444
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 5.9e-21 25-183
no_ID  
Gene3D G3DSA:3.40.50.300 no description 3.3e-23 26-183
HMMPanther PTHR19241 ATP-BINDING 5.8e-144 26-489
HMMPanther PTHR19241:SF20 ATP-BINDING 5.8e-144 26-489
Seg seg seg NA 364-389
498-512
Putative transmembrane regions
  From To
TM segments
SOSUI		 255 277
283 305
333 355
366 388
395 417
Wolf-PSORT
Lj0g3v0104499.1	plas 9, vacu 3, nucl 1, E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0104499.1