Miyakogusa Predicted Gene

Lj0g3v0104399.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N1F2_SOYBN 700 77.7 81.9 (tr|I1N1F2) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G70280.2 503 58.3 69.8 | Symbols: | NHL domain-containing protein | chr1:26466086-26468471 REVERSE LENGTH=509
Medicago Medtr8g063760.1 670 72.5 77.9 | NHL repeat protein | HC | chr8:26718504-26714203 | 20130731
Soybean Glyma18g18550.1 671 77.7 81.2  
LJGI gnl|LJGI|TC69428 1618 99.9 99.9 similar to UniRef100_A7Q2F1 Cluster: Chromosome chr1 scaffold_46, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_46, whole genome shotgun sequence - Vitis vinifera (Grape), partial (54%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0104399.1 length: 500 aa.
IPR001258 NHL repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF01436 NHL 4e-06 173-198
IPR011042 Six-bladed beta-propeller, TolB-like
Gene3D G3DSA:2.120.10.30 no description 1.1e-15 91-258
no_ID  
HMMPanther PTHR13833 FAMILY 8.5e-135 61-498
HMMPanther PTHR13833:SF16 NHL 8.5e-135 61-498
Seg seg seg NA 5-19
22-32
133-148
305-318
374-391
452-462
superfamily SSF63829 Calcium-dependent 4.3e-08 98-277
Putative transmembrane regions
  From To
TM segments
SOSUI		 2 23
271 292
Wolf-PSORT
Lj0g3v0104399.1	vacu 4, chlo 3, plas 3, nucl 2, E.R._plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0104399.1