Miyakogusa Predicted Gene

Lj0g3v0104349.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K3M4_SOYBN 142 68.6 75.5 (tr|I1K3M4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G19540.1 114 57.3 67.0 | Symbols: | Transducin family protein / WD-40 repeat family protein | chr2:8461804-8464347 FORWARD LENGTH=469
Medicago Medtr8g080700.1 138 67.3 74.3 | glutamate-rich WD repeat protein | HC | chr8:34739832-34734055 | 20130731
Soybean Glyma05g28040.2 142 68.6 75.5  
LJGI gnl|LJGI|TC61946 71.9 97.5 97.5 similar to UniRef100_A7PE86 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (43%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0104349.1 length: 101 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 0.0032 32-62
77-101
HMMSmart SM00320 WD40 0.004 23-62
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 3.7e-11 19-101
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 9.046 29-101
superfamily SSF50978 WD40 1.9e-10 22-101
no_ID  
HMMPanther PTHR22850 WD40 4.3e-36 1-101
HMMPanther PTHR22850:SF6 GLUTAMATE 4.3e-36 1-101
Seg seg seg NA 9-23
Wolf-PSORT
Lj0g3v0104349.1	cyto 8, chlo 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0104349.1