Miyakogusa Predicted Gene
- Lj0g3v0104309.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JVJ2_SOYBN |
253 |
82.6 |
86.6 |
(tr|I1JVJ2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G08570.1 |
228 |
72.7 |
84.0 |
| Symbols: | Heavy metal transport/detoxification superfamily protein | chr4:5455123-5455975 REVERSE LENGTH=150 |
| Medicago |
Medtr3g073670.1 |
251 |
81.2 |
84.6 |
| heavy metal transport/detoxification superfamily protein | HC | chr3:33234846-33236304 | 20130731 |
| Soybean |
Glyma04g12040.1 |
253 |
82.6 |
86.6 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0104309.1 |
length: 149 aa. |
| IPR006121 |
Heavy metal-associated domain, HMA |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0030001 |
metal ion transport |
|
|
| Molecular Function |
GO:0046872 |
metal ion binding |
|
|
| HMMPfam |
PF00403 |
HMA |
4.7e-15 |
31-85 |
| ProfileScan |
PS50846 |
HMA_2 |
11.613 |
34-89 |
| superfamily |
SSF55008 |
HMA, |
3.4e-16 |
21-92 |
| no_ID |
|
| Gene3D |
G3DSA:3.30.70.100 |
no description |
8.2e-20 |
24-91 |
| HMMPanther |
PTHR22814 |
COPPER |
4.2e-58 |
12-119 |
| HMMPanther |
PTHR22814:SF47 |
HEAVY-METAL-ASSOCIATED |
4.2e-58 |
12-119 |
| Seg |
seg |
seg |
NA |
15-27 |
- Wolf-PSORT
Lj0g3v0104309.1 chlo 9, cyto 2, nucl 1, plas 1, extr 1, nucl_plas 1, cyto_pero 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0104309.1 |
|