Miyakogusa Predicted Gene

Lj0g3v0104159.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MG10_SOYBN 618 77.9 84.4 (tr|I1MG10) Protein ROOT HAIR DEFECTIVE 3 homolog OS=Glycine max PE=3 SV=1
TAIR_pep AT5G45160.1 480 62.5 75.3 | Symbols: | Root hair defective 3 GTP-binding protein (RHD3) | chr5:18264991-18270035 FORWARD LENGTH=834
Medicago Medtr2g029340.1 598 74.3 83.6 | ROOT HAIR defective 3 GTP-binding family protein | HC | chr2:10952430-10963961 | 20130731
Soybean Glyma15g13380.1 618 77.9 84.4  
LJGI gnl|LJGI|TC59657 2266 99.7 99.7 similar to UniRef100_A7QCR6 Cluster: Chromosome undetermined scaffold_79, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_79, whole genome shotgun sequence - Vitis vinifera (Grape), partial (35%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0104159.1 length: 385 aa.
IPR008803 RHD3/Sey1
method AccNumber shortName E-value location
HMMPfam PF05879 RHD3 1.4e-99 3-370
no_ID  
HMMPanther PTHR10751 GUANYLATE 2.7e-132 27-385
HMMPanther PTHR10751:SF28 SEY-1 2.7e-132 27-385
Seg seg seg NA 166-181
299-311
Putative transmembrane regions
  From To
TM segments
SOSUI		 274 296
301 323
Wolf-PSORT
Lj0g3v0104159.1	plas 5, cyto 3, mito_plas 3, vacu 2, golg 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0104159.1