| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | B7FID7_MEDTR | 239 | 58.8 | 61.1 | (tr|B7FID7) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1 |
| TAIR_pep | AT5G65260.1 | 209 | 53.6 | 58.2 | | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:26080501-26082984 REVERSE LENGTH=220 |
| Medicago | Medtr8g089990.1 | 239 | 58.8 | 61.1 | | polyadenylate-binding protein II | HC | chr8:37630582-37636333 | 20130731 |
| Soybean | Glyma08g14240.1 | 240 | 59.1 | 60.9 | |
| LJGI | gnl|LJGI|TC65696 | 1291 | 100.0 | 100.0 | similar to UniRef100_A1YMZ8 Cluster: Poly(A)-binding protein II-like; n=1; Brassica rapa|Rep: Poly(A)-binding protein II-like - Brassica campestris (Field mustard), partial (83%) |
| Lj0g3v0103959.5 | length: 215 aa. | |||
| IPR000504 | RNA recognition motif domain | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| HMMPfam | PF00076 | RRM_1 | 4e-18 | 90-158 |
| HMMSmart | SM00360 | RNA | 3.1e-21 | 89-160 |
| ProfileScan | PS50102 | RRM | 17.080 | 88-164 |
| IPR012677 | Nucleotide-binding, alpha-beta plait | |||
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Gene3D | G3DSA:3.30.70.330 | no description | 1.8e-24 | 73-159 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 31-66 |
| HMMPanther | PTHR23365 | POLY-A | 4.9e-57 | 1-215 |
| Seg | seg | seg | NA | 18-58 73-77 131-144 185-199 |
| superfamily | SSF54928 | RNA-binding | 1.6e-24 | 78-185 |
Lj0g3v0103959.5 nucl 8, cyto 4, cysk_nucl 4, nucl_plas 4
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0103959.5 |