Miyakogusa Predicted Gene

Lj0g3v0103929.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KV23_SOYBN 337 73.9 79.2 (tr|I1KV23) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G59870.1 301 65.8 73.8 | Symbols: PEN3, PDR8, ATPDR8, ABCG36, ATABCG36 | ABC-2 and Plant PDR ABC-type transporter family protein | chr1:22034661-22039844 FORWARD LENGTH=1469
Medicago Medtr8g014360.1 329 71.6 76.4 | drug resistance transporter-like ABC domain protein | HC | chr8:4493488-4504343 | 20130731
Soybean Glyma08g21540.1 337 73.9 79.2  
LJGI gnl|LJGI|TC78548 844 95.0 95.0 similar to UniRef100_Q9XIE2 Cluster: Pleiotropic drug resistance protein 8; n=1; Arabidopsis thaliana|Rep: Pleiotropic drug resistance protein 8 - Arabidopsis thaliana (Mouse-ear cress), partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0103929.1 length: 225 aa.
IPR013525 ABC-2 type transporter
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
HMMPfam PF01061 ABC2_membrane 1.9e-42 3-162
no_ID  
HMMPanther PTHR19241 ATP-BINDING 1.6e-126 1-225
HMMPanther PTHR19241:SF10 ATP-BINDING 1.6e-126 1-225
Seg seg seg NA 75-93
198-216
Putative transmembrane regions
  From To
TM segments
SOSUI		 6 28
47 69
75 97
111 133
144 166
196 218
Wolf-PSORT
Lj0g3v0103929.1	vacu 11, cyto 1, extr 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0103929.1