Miyakogusa Predicted Gene

Lj0g3v0103919.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3T7Y6_LOTJA 204 69.0 69.0 (tr|I3T7Y6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT5G52370.1 137 73.5 85.5 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:21260558-21261203 REVERSE LENGTH=142

Medicago Medtr2g097890.1 184 85.1 89.1 | hypothetical protein | HC | chr2:41817978-41814357 | 20130731

Soybean Glyma15g03790.1 179 82.2 89.1

LJGI gnl|LJGI|TC58886 583 96.5 96.5 similar to UniRef100_A7NYN4 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (49%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0103919.1 length: 155 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 12-42
46-55

Wolf-PSORT

Lj0g3v0103919.1 mito 7, chlo 6

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0103919.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3T7Y6_LOTJA	204	69.0	69.0	(tr\|I3T7Y6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT5G52370.1	137	73.5	85.5	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G58990.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). \| chr5:21260558-21261203 REVERSE LENGTH=142
Medicago	Medtr2g097890.1	184	85.1	89.1	\| hypothetical protein \| HC \| chr2:41817978-41814357 \| 20130731
Soybean	Glyma15g03790.1	179	82.2	89.1
LJGI	gnl\|LJGI\|TC58886	583	96.5	96.5	similar to UniRef100_A7NYN4 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (49%)

no_ID
Lj0g3v0103919.1				length: 155 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	12-42 46-55