Miyakogusa Predicted Gene

Lj0g3v0103829.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M0Q7_SOYBN 591 80.9 91.5 (tr|K7M0Q7) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
TAIR_pep AT2G40030.1 374 55.7 74.8 | Symbols: NRPD1B, DRD3, ATNRPD1B, DMS5, NRPE1 | nuclear RNA polymerase D1B | chr2:16715089-16723406 FORWARD LENGTH=1976
Medicago Medtr8g038990.1 579 81.1 90.0 | DNA-directed RNA polymerase | HC | chr8:14459096-14475944 | 20130731
Soybean Glyma13g26690.1 592 80.9 91.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0103829.1 length: 339 aa.
IPR007081 RNA polymerase Rpb1, domain 5
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003899 DNA-directed RNA polymerase activity    
Biological Process GO:0006351 transcription, DNA-dependent    
HMMPfam PF04998 RNA_pol_Rpb1_5 1.4e-08 144-236
no_ID  
HMMPanther PTHR19376 DNA-DIRECTED 1.6e-121 1-337
HMMPanther PTHR19376:SF7 DNA-DIRECTED 1.6e-121 1-337
superfamily SSF64484 beta 4.8e-28 4-336
Wolf-PSORT
Lj0g3v0103829.1	cyto 7, nucl 5, chlo 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0103829.1 Not targeted -56.577 -6.947 -12.110 84.68% -37.520