Miyakogusa Predicted Gene
- Lj0g3v0102449.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LTU2_SOYBN |
399 |
76.0 |
85.0 |
(tr|I1LTU2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G33790.1 |
282 |
52.7 |
69.4 |
| Symbols: CER4, G7, FAR3 | Jojoba acyl CoA reductase-related male sterility protein | chr4:16204325-16207891 REVERSE LENGTH=493 |
| Medicago |
Medtr2g086090.1 |
392 |
73.6 |
83.7 |
| gland-specific fatty acyl-CoA reductase | HC | chr2:36202981-36192626 | 20130731 |
| Soybean |
Glyma12g30870.1 |
399 |
76.0 |
85.0 |
|
| LJGI |
gnl|LJGI|TC63658 |
1249 |
99.8 |
99.8 |
similar to UniRef100_A7R0D9 Cluster: Chromosome chr6 scaffold_305, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_305, whole genome shotgun sequence - Vitis vinifera (Grape), partial (42%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0102449.1 |
length: 246 aa. |
| IPR013120 |
Male sterility, NAD-binding |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF07993 |
NAD_binding_4 |
5.5e-16 |
1-73 |
| IPR016040 |
NAD(P)-binding domain |
| Gene3D |
G3DSA:3.40.50.720 |
no description |
4.7e-07 |
2-91 |
| IPR026055 |
Fatty acyl-CoA reductase |
| Molecular Function |
GO:0080019 |
fatty-acyl-CoA reductase (alcohol-forming) activity |
|
|
| HMMPanther |
PTHR11011 |
MALE |
2.3e-113 |
1-246 |
| HMMPfam |
PF03015 |
Sterile |
1.2e-16 |
147-246 |
| no_ID |
|
| HMMPanther |
PTHR11011:SF1 |
MALE |
2.3e-113 |
1-246 |
| Seg |
seg |
seg |
NA |
66-81 |
| superfamily |
SSF51735 |
NAD(P)-binding |
5.1e-07 |
1-105 |
- Wolf-PSORT
Lj0g3v0102449.1 chlo 7, cyto 3, nucl 1, plas 1, vacu 1, E.R. 1, nucl_plas 1, E.R._vacu 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0102449.1 |
|