Miyakogusa Predicted Gene

Lj0g3v0102289.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SC80_LOTJA 631 94.7 95.0 (tr|I3SC80) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G27740.1 551 78.8 90.3 | Symbols: EMB161, EMB2775, EMB251, RFC3 | ATPase family associated with various cellular activities (AAA) | chr5:9823831-9826869 FORWARD LENGTH=354
Medicago Medtr6g027590.1 596 88.1 92.2 | DNA replication factor C complex subunit 3 | HC | chr6:9558620-9564430 | 20130731
Soybean Glyma04g42550.2 129 34.2 50.9  
LJGI gnl|LJGI|TC60980 1905 100.0 100.0 similar to UniRef100_A7PZY4 Cluster: Chromosome chr8 scaffold_41, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_41, whole genome shotgun sequence - Vitis vinifera (Grape), partial (98%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0102289.1 length: 321 aa.
IPR003593 AAA+ ATPase domain
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 6.1e-07 33-192
IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006260 DNA replication    
superfamily SSF48019 DNA 5.4e-22 250-320
IPR013748 Replication factor C, C-terminal domain
HMMPfam PF08542 Rep_fac_C 2.4e-12 252-320
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 7.3e-42 1-259
no_ID  
Gene3D G3DSA:1.10.8.60 no description 1.5e-23 190-252
Gene3D G3DSA:1.20.272.10 no description 5.7e-24 253-320
Gene3D G3DSA:3.40.50.300 no description 2.1e-52 2-188
HMMPanther PTHR11669 REPLICATION 4.8e-109 1-320
HMMPfam PF13177 DNA_pol3_delta2 5.3e-12 19-188
Seg seg seg NA 294-309
Wolf-PSORT
Lj0g3v0102289.1	cyto 12, nucl 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0102289.1