Miyakogusa Predicted Gene

Lj0g3v0102179.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JB35_SOYBN 362 53.9 62.4 (tr|I1JB35) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G23770.1 76.6 29.4 47.4 | Symbols: | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein | chr2:10120242-10122080 REVERSE LENGTH=612
Medicago Medtr5g042440.1 328 47.7 59.9 | LysM-domain receptor-like kinase | HC | chr5:18654547-18659757 | 20130731
Soybean Glyma02g00250.1 362 53.9 62.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0102179.1 length: 396 aa.
IPR002482 Peptidoglycan-binding Lysin subgroup
method AccNumber shortName E-value location
Biological Process GO:0016998 cell wall macromolecule catabolic process    
HMMSmart SM00257 Lysin 8.6e-06 131-178
194-237
IPR013320 Concanavalin A-like lectin/glucanase, subgroup
Gene3D G3DSA:2.60.120.200 no description 0.00024 250-365
IPR018392 Peptidoglycan-binding lysin domain
Biological Process GO:0016998 cell wall macromolecule catabolic process    
HMMPfam PF01476 LysM 5.2e-06 195-237
no_ID  
Gene3D G3DSA:3.10.350.10 no description 2.2e-08 193-238
HMMPanther PTHR24420 FAMILY 8.4e-18 6-378
Seg seg seg NA 4-18
20-29
48-59
91-107
247-261
268-290
298-316
superfamily SSF54106 LysM 6e-08 192-239
Putative transmembrane regions
  From To
TM segments
SOSUI		 15 37
269 291
Wolf-PSORT
Lj0g3v0102179.1	vacu 4, chlo 3, extr 3, mito 2, nucl 1, E.R. 1, cyto_mito 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0102179.1