Miyakogusa Predicted Gene
- Lj0g3v0102059.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7J7A7_MEDTR |
296 |
88.6 |
95.6 |
(tr|G7J7A7) TIR-NBS-LRR-TIR type disease resistance protein OS=Medicago truncatula GN=MTR_3g080470 PE=4 SV=1 |
| TAIR_pep |
AT5G36930.2 |
162 |
54.3 |
70.9 |
| Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr5:14567771-14571916 REVERSE LENGTH=1191 |
| Medicago |
Medtr3g080470.4 |
296 |
88.6 |
95.6 |
| disease resistance protein (TIR-NBS-LRR class), putative | HC | chr3:36409135-36401248 | 20130731 |
| Soybean |
Glyma02g43630.1 |
208 |
63.3 |
82.7 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0102059.1 |
length: 158 aa. |
| IPR000157 |
Toll/interleukin-1 receptor homology (TIR) domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| Biological Process |
GO:0007165 |
signal transduction |
|
|
| HMMPfam |
PF01582 |
TIR |
9.2e-37 |
14-146 |
| HMMSmart |
SM00255 |
Toll |
3.2e-45 |
11-151 |
| ProfileScan |
PS50104 |
TIR |
27.437 |
10-151 |
| superfamily |
SSF52200 |
Toll/Interleukin |
3.6e-44 |
1-154 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.10140 |
no description |
3.9e-23 |
8-145 |
| HMMPanther |
PTHR11017 |
LEUCINE-RICH |
4.5e-60 |
8-158 |
| HMMPanther |
PTHR11017:SF130DISEASE |
RESISTANCE |
4.5e-60 |
8-158 |
- Wolf-PSORT
Lj0g3v0102059.1 nucl 4.5, cyto_nucl 3.5, chlo 2, mito 2, chlo_mito 2, cyto 1.5, plas 1.5, golg_plas 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0102059.1 |
|