| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | M5VR75_PRUPE | 419 | 85.3 | 87.4 | (tr|M5VR75) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008972mg PE=4 SV=1 |
| TAIR_pep | AT3G10330.1 | 408 | 82.8 | 86.1 | | Symbols: | Cyclin-like family protein | chr3:3199907-3201642 FORWARD LENGTH=312 |
| Medicago | Medtr7g091230.1 | 405 | 83.3 | 85.8 | | transcription initiation factor IIB | HC | chr7:36014917-36009852 | 20130731 |
| Soybean | Glyma02g32370.1 | 409 | 89.5 | 91.4 | |
| LJGI | gnl|LJGI|TC66310 | 1174 | 100.0 | 100.0 | homologue to UniRef100_P48513 Cluster: Transcription initiation factor IIB; n=1; Glycine max|Rep: Transcription initiation factor IIB - Glycine max (Soybean), partial (62%) |
| Lj0g3v0102019.1 | length: 238 aa. | |||
| IPR000812 | Transcription factor TFIIB | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Biological Process | GO:0006352 | DNA-dependent transcription, initiation | ||
| Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| FPrintScan | PR00685 | TIFACTORIIB | 1.5e-39 | 78-97 105-120 138-156 170-186 202-216 |
| HMMPanther | PTHR11618 | TRANSCRIPTION | 6.1e-91 | 8-238 |
| IPR013150 | Transcription factor TFIIB, cyclin-like domain | |||
| Molecular Function | GO:0017025 | TBP-class protein binding | ||
| HMMPfam | PF00382 | TFIIB | 6.9e-08 | 38-102 139-207 |
| IPR013763 | Cyclin-like | |||
| Gene3D | G3DSA:1.10.472.10 | no description | 1.3e-22 | 34-136 137-225 |
| HMMSmart | SM00385 | domain | 0.00021 | 36-118 137-216 |
| superfamily | SSF47954 | Cyclin-like | 3e-22 | 132-238 30-124 |
| IPR023486 | Transcription factor TFIIB, conserved site | |||
| PatternScan | PS00782 | TFIIB | NA | 70-85 |
| no_ID | ||||
| Seg | seg | seg | NA | 7-18 151-162 |
Lj0g3v0102019.1 nucl 6.5, mito 4, cyto_nucl 4, chlo 1, extr 1, pero 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0102019.1 | Not targeted | -24.123 | -0.114 | -2.113 | 19.21% | -21.896 |