Miyakogusa Predicted Gene

Lj0g3v0101969.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M5D8_SOYBN 819 87.1 91.3 (tr|I1M5D8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G17720.2 737 79.1 85.8 | Symbols: ATB BETA | Protein phosphatase 2A, regulatory subunit PR55 | chr1:6093949-6098065 REVERSE LENGTH=500
Medicago Medtr8g015880.3 810 86.0 90.8 | protein phosphatase 2A 55 kDa regulatory subunit B | HC | chr8:5234361-5225713 | 20130731
Soybean Glyma13g42800.2 819 87.1 91.3  
LJGI gnl|LJGI|TC63026 1380 99.2 99.2 homologue to UniRef100_Q9FVD4 Cluster: Ser/Thr specific protein phosphatase 2A B regulatory subunit beta isoform; n=1; Medicago sativa subsp. x varia|Rep: Ser/Thr specific protein phosphatase 2A B regulatory subunit beta isoform - Medicago varia (Alfalfa), partial (57%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0101969.2 length: 459 aa.
IPR000009 Protein phosphatase 2A, regulatory subunit PR55
method AccNumber shortName E-value location
Cellular Component GO:0000159 protein phosphatase type 2A complex    
Biological Process GO:0007165 signal transduction    
Molecular Function GO:0008601 protein phosphatase type 2A regulator activity    
FPrintScan PR00600 PP2APR55 1.5e-145 47-67
94-122
123-151
236-263
264-291
292-320
321-348
349-376
377-402
403-429
HMMPIR PIRSF037309 Serine/threonine-protein 6.4e-236 12-459
HMMPanther PTHR11871 PROTEIN 2.6e-278 16-458
IPR001680 WD40 repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00320 WD40 2.5e+02 33-68
107-147
225-264
275-315
334-372
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 2e-26 234-434
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
superfamily SSF50978 WD40 1.9e-30 32-429
IPR018067 Protein phosphatase 2A, regulatory subunit PR55, conserved site
PatternScan PS01024 PR55_1 NA 107-121
PatternScan PS01025 PR55_2 NA 234-248
IPR019775 WD40 repeat, conserved site
PatternScan PS00678 WD_REPEATS_1 NA 251-265
no_ID  
HMMPanther PTHR11871:SF0 PROTEIN 2.6e-278 16-458
Seg seg seg NA 144-155
171-181
Wolf-PSORT
Lj0g3v0101969.2	nucl 8, cyto 3, vacu 1, pero 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0101969.2