Miyakogusa Predicted Gene

Lj0g3v0101809.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T1K3_LOTJA 164 79.6 80.6 (tr|I3T1K3) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G35785.3 134 77.2 89.9 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:16953708-16955127 REVERSE LENGTH=207
Medicago Medtr5g023060.2 153 88.5 94.9 | RNA-binding (RRM/RBD/RNP motif) family protein | HC | chr5:9164769-9166628 | 20130731
Soybean Glyma01g36670.1 152 89.0 92.7  
LJGI gnl|LJGI|TC57417 955 99.2 99.2 similar to UniRef100_A7R1R9 Cluster: Chromosome chr4 scaffold_373, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_373, whole genome shotgun sequence - Vitis vinifera (Grape), partial (71%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0101809.1 length: 166 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 1.3e-14 93-160
HMMSmart SM00360 RNA 2.5e-19 92-165
ProfileScan PS50102 RRM 14.778 91-166
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 8.1e-19 71-165
no_ID  
HMMPanther PTHR15241 TRANSFORMER-2-RELATED 2.4e-45 6-165
Seg seg seg NA 2-63
68-84
superfamily SSF54928 RNA-binding 1.2e-23 29-166
Wolf-PSORT
Lj0g3v0101809.1	nucl 7, mito 5, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0101809.1