Miyakogusa Predicted Gene

Lj0g3v0101269.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL F6I3W2_VITVI 893 61.0 75.3 (tr|F6I3W2) Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0041g01110 PE=4 SV=1
TAIR_pep AT3G13880.1 653 51.1 66.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:4572180-4574426 FORWARD LENGTH=748
Medicago Medtr6g022140.1 1001 68.0 78.5 | pentatricopeptide (PPR) repeat protein | HC | chr6:7700828-7696262 | 20130731
Soybean Glyma15g42850.1 489 38.8 56.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0101269.1 length: 756 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.57 111-133
451-481
491-514
HMMPfam PF13041 PPR_2 3.2e-07 242-293
348-395
HMMPfam PF13812 PPR_3 0.0061 141-172
HMMTigr TIGR00756 PPR: 0.0016 141-172
350-384
451-484
ProfileScan PS51375 PPR 7.322 139-174
108-138
242-281
211-241
282-316
348-382
449-483
418-448
484-514
586-620
no_ID  
HMMPanther PTHR24015 FAMILY 1.6e-245 2-756
HMMPanther PTHR24015:SF32 SUBFAMILY 1.6e-245 2-756
HMMPfam PF14432 DYW_deaminase 3.7e-11 634-746
Wolf-PSORT
Lj0g3v0101269.1	chlo 13.5, chlo_mito 7.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0101269.1