Miyakogusa Predicted Gene

Lj0g3v0100959.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KEZ4_SOYBN 427 60.6 66.7 (tr|I1KEZ4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G20590.1 252 45.3 59.8 | Symbols: | Reticulon family protein | chr2:8867243-8869166 REVERSE LENGTH=431
Medicago Medtr4g078740.1 317 65.7 75.3 | reticulon-like protein B2 | HC | chr4:30430555-30433018 | 20130731
Soybean Glyma06g44420.1 427 60.6 66.7  
LJGI gnl|LJGI|FS329266 1229 100.0 100.0 similar to UniRef100_A7PJ84 Cluster: Chromosome chr12 scaffold_18, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_18, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0100959.1 length: 460 aa.
IPR003388 Reticulon
method AccNumber shortName E-value location
Cellular Component GO:0005783 endoplasmic reticulum    
HMMPanther PTHR10994 RETICULON 1.7e-63 107-435
HMMPfam PF02453 Reticulon 1.8e-17 237-392
ProfileScan PS50845 RETICULON 14.012 236-386
no_ID  
HMMPanther PTHR10994:SF27 RETICULON-RELATED 1.7e-63 107-435
Seg seg seg NA 39-70
98-122
168-175
208-221
250-264
282-292
Putative transmembrane regions
  From To
TM segments
SOSUI		 245 267
270 292
307 328
349 371
408 430
Wolf-PSORT
Lj0g3v0100959.1	chlo 7, nucl 3, plas 3, nucl_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0100959.1