Miyakogusa Predicted Gene

Lj0g3v0099929.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JIX7_MEDTR 512 73.7 80.7 (tr|G7JIX7) DEAD-box ATP-dependent RNA helicase OS=Medicago truncatula GN=MTR_4g101040 PE=4 SV=1
TAIR_pep AT3G02065.3 70.1 63.3 81.6 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr3:359136-360734 FORWARD LENGTH=505
Medicago Medtr6g033070.1 68.2 67.5 85.0 | DEAD-box ATP-dependent RNA helicase | HC | chr6:10401560-10398230 | 20130731
Soybean Glyma05g04570.1 207 79.2 84.0  
LJGI gnl|LJGI|TC81552 781 99.0 99.0 similar to UniRef100_A7QY89 Cluster: Chromosome chr2 scaffold_241, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_241, whole genome shotgun sequence - Vitis vinifera (Grape), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0099929.1 length: 372 aa.
IPR001878 Zinc finger, CCHC-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF00098 zf-CCHC 8.5e-05 247-260
ProfileScan PS50158 ZF_CCHC 9.735 247-260
IPR007529 Zinc finger, HIT-type
HMMPfam PF04438 zf-HIT 4.5e-05 162-188
no_ID  
HMMPanther PTHR24772 FAMILY 9.8e-15 154-203
HMMPanther PTHR24772:SF7 SUBFAMILY 9.8e-15 154-203
Seg seg seg NA 55-66
345-360
Wolf-PSORT
Lj0g3v0099929.1	nucl 10, cyto 1, mito 1, plas 1, cysk 1, cysk_plas 1, mito_plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0099929.1