database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | I1JU70_SOYBN | 239 | 86.5 | 93.7 | (tr|I1JU70) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
TAIR_pep | AT5G25150.1 | 155 | 54.6 | 71.5 | | Symbols: TAF5 | TBP-associated factor 5 | chr5:8677117-8682058 FORWARD LENGTH=669 |
Medicago | Medtr3g106080.1 | 231 | 83.5 | 90.6 | | TBP-associated factor 5 | HC | chr3:48932864-48942802 | 20130731 |
Soybean | Glyma04g06540.1 | 239 | 86.5 | 93.7 | |
LJGI | gnl|LJGI|TC58844 | 737 | 100.0 | 100.0 | similar to UniRef100_A7P5W9 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%) |
Lj0g3v0099219.1 | length: 124 aa. | |||
IPR006594 | LisH dimerisation motif | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Molecular Function | GO:0005515 | protein binding | ||
ProfileScan | PS50896 | LISH | 8.357 | 2-34 |
IPR007582 | TFIID subunit, WD40-associated region | |||
Cellular Component | GO:0005634 | nucleus | ||
Biological Process | GO:0006355 | regulation of transcription, DNA-dependent | ||
HMMPfam | PF04494 | TFIID_90kDa | 4.1e-26 | 48-122 |
no_ID | ||||
HMMPanther | PTHR19879 | TRANSCRIPTION | 3.2e-20 | 4-115 |
HMMPanther | PTHR19879:SF0 | SUBFAMILY | 3.2e-20 | 4-115 |
From | To | |
---|---|---|
TM segments SOSUI |
82 | 104 |
Lj0g3v0099219.1 cyto 5, nucl 3, mito 3, cyto_plas 3
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj0g3v0099219.1 | Not targeted | -46.161 | -0.479 | -16.997 | 66.99% | -28.685 |