Miyakogusa Predicted Gene

Lj0g3v0098349.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JKE3_SOYBN 786 90.5 95.9 (tr|I1JKE3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G61140.1 685 79.4 89.3 | Symbols: FUS6, ATFUS6, CSN1, COP11, EMB78, ATSK31, SK31 | 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain | chr3:22626335-22628895 FORWARD LENGTH=441
Medicago Medtr8g432630.1 753 87.1 93.0 | COP9 signalosome complex subunit 1 | HC | chr8:12373860-12369630 | 20130731
Soybean Glyma03g01880.1 786 90.5 95.9  
LJGI gnl|LJGI|TC58111 2462 100.0 100.0 similar to UniRef100_A7PXZ3 Cluster: Chromosome chr15 scaffold_37, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_37, whole genome shotgun sequence - Vitis vinifera (Grape), partial (95%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0098349.1 length: 412 aa.
IPR000717 Proteasome component (PCI) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF01399 PCI 5.1e-16 265-366
HMMSmart SM00088 motif 1e-17 300-383
IPR011991 Winged helix-turn-helix DNA-binding domain
Gene3D G3DSA:1.10.10.10 no description 1.9e-07 298-374
IPR019585 26S proteasome, regulatory subunit Rpn7
HMMPfam PF10602 RPN7 6.9e-59 75-249
no_ID  
Coil coil coiled-coil NA 79-111
HMMPanther PTHR14145 26S 4.9e-194 1-411
HMMPanther PTHR14145:SF2 COP9 4.9e-194 1-411
superfamily SSF46785 "Winged 5.9e-15 294-377
Wolf-PSORT
Lj0g3v0098349.1	cyto 10.5, cyto_E.R. 6.33333, E.R._vacu 1.83333, vacu 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0098349.1