Miyakogusa Predicted Gene
- Lj0g3v0098329.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7L0A1_SOYBN |
163 |
82.7 |
87.8 |
(tr|K7L0A1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G23040.1 |
120 |
60.6 |
76.6 |
| Symbols: | Ubiquitin-like superfamily protein | chr4:12075672-12078622 REVERSE LENGTH=525 |
| Medicago |
Medtr8g432670.1 |
173 |
83.3 |
91.7 |
| Ara4-interacting protein | HC | chr8:12392209-12398954 | 20130731 |
| Soybean |
Glyma07g08390.1 |
161 |
82.7 |
87.8 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0098329.2 |
length: 98 aa. |
| IPR001012 |
UBX |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00789 |
UBX |
1.2e-17 |
17-96 |
| HMMSmart |
SM00166 |
Domain |
0.0058 |
13-97 |
| ProfileScan |
PS50033 |
UBX |
16.788 |
16-94 |
| no_ID |
|
| Gene3D |
G3DSA:3.10.20.90 |
no description |
3.2e-22 |
14-96 |
| HMMPanther |
PTHR23322 |
FAS-ASSOCIATED |
6.3e-36 |
5-98 |
| HMMPanther |
PTHR23322:SF3 |
ARA4-INTERACTING |
6.3e-36 |
5-98 |
| superfamily |
SSF54236 |
Ubiquitin-like |
1.8e-24 |
5-97 |
- Wolf-PSORT
Lj0g3v0098329.2 cyto 4, chlo 3, extr 3, cyto_nucl 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0098329.2 |
|