Miyakogusa Predicted Gene
- Lj0g3v0097739.3
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IHU2_MEDTR |
761 |
77.6 |
84.2 |
(tr|G7IHU2) EFR3-like protein OS=Medicago truncatula GN=MTR_2g098850 PE=4 SV=1 |
| TAIR_pep |
AT1G05960.1 |
575 |
60.8 |
73.9 |
| Symbols: | ARM repeat superfamily protein | chr1:1808478-1815060 REVERSE LENGTH=982 |
| Medicago |
Medtr2g098850.1 |
761 |
77.6 |
84.2 |
| cyclin-like protein | HC | chr2:42328986-42318798 | 20130731 |
| Soybean |
Glyma13g41900.2 |
761 |
78.6 |
82.7 |
|
| LJGI |
gnl|LJGI|FS331389 |
1082 |
99.8 |
99.8 |
similar to UniRef100_A7QM62 Cluster: Chromosome chr5 scaffold_124, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_124, whole genome shotgun sequence - Vitis vinifera (Grape), partial (19%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0097739.3 |
length: 492 aa. |
| IPR011989 |
Armadillo-like helical |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:1.25.10.10 |
no description |
0.00035 |
280-380 |
| IPR016024 |
Armadillo-type fold |
| Molecular Function |
GO:0005488 |
binding |
|
|
| superfamily |
SSF48371 |
ARM |
2.6e-08 |
63-411 |
| no_ID |
|
| HMMPanther |
PTHR12444 |
UNCHARACTERIZED |
8.9e-129 |
2-463 |
| Seg |
seg |
seg |
NA |
226-240 |
- Wolf-PSORT
Lj0g3v0097739.3 chlo 7, nucl 3, mito 1, plas 1, extr 1, E.R. 1, E.R._plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0097739.3 |
|