Miyakogusa Predicted Gene

Lj0g3v0097169.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MU29_SOYBN 322 90.8 93.1 (tr|I1MU29) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G60430.2 300 83.2 89.0 | Symbols: ARPC3 | actin-related protein C3 | chr1:22264797-22265682 REVERSE LENGTH=174
Medicago Medtr4g115900.1 313 88.4 92.4 | actin-related protein 2/3 complex subunit 3 | HC | chr4:47894323-47890943 | 20130731
Soybean Glyma17g11730.1 322 90.8 93.1  
LJGI gnl|LJGI|TC65324 1033 99.8 99.8 homologue to UniRef100_A7QTM3 Cluster: Chromosome chr11 scaffold_170, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_170, whole genome shotgun sequence - Vitis vinifera (Grape), partial (98%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0097169.1 length: 174 aa.
IPR007204 ARP2/3 complex, 21kDa subunit (p21-Arc)
method AccNumber shortName E-value location
Cellular Component GO:0005856 cytoskeleton    
Cellular Component GO:0005885 Arp2/3 protein complex    
Biological Process GO:0030833 regulation of actin filament polymerization    
Biological Process GO:0034314 Arp2/3 complex-mediated actin nucleation    
Gene3D G3DSA:1.10.1760.10 no description 3.5e-69 2-170
HMMPIR PIRSF016315 Actin-related 8.3e-105 1-174
HMMPanther PTHR12391 ARP2/3 2.1e-100 1-173
HMMPfam PF04062 P21-Arc 5.7e-64 2-170
superfamily SSF69060 Arp2/3 6.6e-64 1-173
no_ID  
HMMPanther PTHR12391:SF0 SUBFAMILY 2.1e-100 1-173
Seg seg seg NA 111-121
Putative transmembrane regions
  From To
TM segments
SOSUI		 59 80
Wolf-PSORT
Lj0g3v0097169.1	cyto 9.5, cyto_E.R. 5.5, cysk 2, nucl 1, golg 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0097169.1