Miyakogusa Predicted Gene

Lj0g3v0096739.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL C6T5K8_SOYBN 65.1 82.4 91.2 (tr|C6T5K8) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT2G35736.2 59.3 73.5 85.3 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25225.1). | chr2:15023084-15023254 REVERSE LENGTH=56

Medicago Medtr2g105230.2 57.8 73.5 88.2 | hypothetical protein | HC | chr2:45369668-45371872 | 20130731

Soybean Glyma07g02520.2 65.1 82.4 91.2

LJGI gnl|LJGI|TC74923 204 100.0 100.0 similar to UniRef100_Q4RZA0 Cluster: Chromosome 1 SCAF14944, whole genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep: Chromosome 1 SCAF14944, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer), partial (16%)

Putative transmembrane regions

From To

TM segments
SOSUI 2 24

Wolf-PSORT

Lj0g3v0096739.1 extr 7, chlo 5, cyto 1, mito 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0096739.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	C6T5K8_SOYBN	65.1	82.4	91.2	(tr\|C6T5K8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT2G35736.2	59.3	73.5	85.3	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25225.1). \| chr2:15023084-15023254 REVERSE LENGTH=56
Medicago	Medtr2g105230.2	57.8	73.5	88.2	\| hypothetical protein \| HC \| chr2:45369668-45371872 \| 20130731
Soybean	Glyma07g02520.2	65.1	82.4	91.2
LJGI	gnl\|LJGI\|TC74923	204	100.0	100.0	similar to UniRef100_Q4RZA0 Cluster: Chromosome 1 SCAF14944, whole genome shotgun sequence; n=1; Tetraodon nigroviridis\|Rep: Chromosome 1 SCAF14944, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer), partial (16%)