Miyakogusa Predicted Gene

Lj0g3v0096699.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7I997_MEDTR 323 88.5 92.5 (tr|G7I997) Transcription factor BEE OS=Medicago truncatula GN=MTR_1g059270 PE=4 SV=1
TAIR_pep AT3G57800.2 216 61.7 71.3 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr3:21408034-21411321 REVERSE LENGTH=379
Medicago Medtr1g059270.1 323 88.5 92.5 | transcription factor | HC | chr1:21508003-21513939 | 20130731
Soybean Glyma10g12210.1 314 87.4 90.8  
LJGI gnl|LJGI|AV772495 446 99.1 99.1 homologue to UniRef100_A2Q3E9 Cluster: Helix-loop-helix DNA-binding; n=1; Medicago truncatula|Rep: Helix-loop-helix DNA-binding - Medicago truncatula (Barrel medic), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0096699.1 length: 214 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10 no description 4.4e-13 55-116
HMMPfam PF00010 HLH 1.8e-06 58-105
HMMSmart SM00353 helix 1.8e-07 60-110
ProfileScan PS50888 BHLH 14.145 54-104
superfamily SSF47459 HLH, 6.4e-14 52-137
no_ID  
HMMPanther PTHR12565 STEROL 4.8e-38 45-131
HMMPanther PTHR12565:SF7 BASIC 4.8e-38 45-131
Seg seg seg NA 6-24
29-40
Wolf-PSORT
Lj0g3v0096699.1	nucl 9.5, cyto_nucl 5.5, plas 1.5, golg_plas 1.5, chlo 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0096699.1